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Terminology used in this article.

Journal: PLoS Computational Biology

Article Title: A compiler for biological networks on silicon chips

doi: 10.1371/journal.pcbi.1008063

Figure Lengend Snippet: Terminology used in this article.

Article Snippet: Block simulation , A circuit–level simulation (performed on a computer) of a specific configuration of the cytomorphic chip (including parameters and connections). This simulation is based on the ODE model of , which shows the transfer function for every component in the block. A block simulation can be performed using either Simulink or libroadrunner [ ]. In either case, the files to run the block simulation are generated by the compiler. .

Techniques: Blocking Assay, Binding Assay, Expressing